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c3fb382d8485dab4cd59eb0e02f58fdb jobTitle Lecturer in Chemistry
c3fb382d8485dab4cd59eb0e02f58fdb research overview <p>Altered patterns of cellular carbohydrates are characteristic of many disease states.&nbsp; Changes in both in the sugars displayed upon the surface of proteins and lipids and the cytosolic free oligosaccharides released from cellular degradation pathways provide insights into disease states as well factors influencing protein catabolism and cellular metabolism.&nbsp; As such, changes in the distribution of such species can be used as markers to reveal perturbations in cellular metabolic processes.&nbsp;&nbsp;These markers have the potential to be used as diagnostics and for the purpose of understanding the effects of perturbations in cellular&nbsp;processes resulting from outside interventions such as drug treatments.</p><p>In addition to the detection of aberrant glycosylation states, characterisation of interactions between glycans and carbohydrate binding proteins has the potential to directly inform the development of the therapeutic agents.&nbsp; As well as the identification of new interaction partners,&nbsp;the characterisation of glycosylated proteins also represents a huge challenge for the pharmaceutical industry. Many modern and emergent biopharmaceuticals and therapies are based upon monoclonal antibodies and other protein structures which are heavily glycosylated.<strong>&nbsp;&nbsp;</strong>Modification&nbsp;of the glycosylation states of such therapeutics impacts not only their efficacy but also their immunogenicity; and glycan analysis, particularly the analysis of sialic acid, is a regulatory requirement.&nbsp; As such, there is a burgeoning market for tools to facilitate the accurate structural analysis of carbohydrate structures, as it is imperative that analytical methods keep pace with the development of increasingly complex therapeutic agents.&nbsp;</p><p>My research interests are broadly based upon using chemical biology tools for the synthesis, structural characterisation and elucidation of function of biologically relevant carbohydrates.&nbsp;My group work closely alongside industrial companies in the fine chemical, biotechnological&nbsp;and pharmaceutical industry&nbsp;as well as&nbsp;academic partners in the biomedical sciences.&nbsp;&nbsp;</p><h5>Grants and Funding</h5><p><strong>A</strong><strong>ward:&nbsp;</strong>EPSRC First Grant Scheme<strong>(2016)</strong></p><p><strong>Title of Project:</strong>Integrated workflows for glycan analysis: tagging strategies to facilitate structural and functional characterisation of carbohydrates -&nbsp;&pound;100,802&nbsp;</p><p><strong>Award:</strong>&nbsp;Royal Society Research Grant 2016R1&nbsp;<strong>(2016)</strong></p><p><strong>Title of Project:</strong>&nbsp;Activity-based probes for glycosidases - covalent iminosugar enzyme inhibitors bearing multifunctional tags for discovery and functional characterisation of novel biocatalysts&nbsp;-&pound;10,500</p><p><strong>Award:&nbsp;</strong>IBCarb Summer Studentship&nbsp;<strong>(2016)</strong></p><p><strong>Title of Project:&nbsp;</strong>Integrated workflows for carbohydrate analysis - development of methodology to facilitate functional characterization and downstream use of complex carbohydrates isolated from natural sources&nbsp;-&pound;2,500</p><p><strong>Award:</strong>BBSRC Industrial Biotechnology Catalyst (IBCAT) BB/M028879/1<strong>(2015)</strong></p><p><strong>Title of Project:</strong>Chemo-enzymatic Production of Specialty Glycans -&pound;364,803 (duration: 5 years)&nbsp;</p><p><strong>Award:&nbsp;</strong>IBCarb BBSRC NIBB Business Interaction Voucher (IBCarb-BIV-0915-011)<strong>(2015)</strong></p><p><strong>Title of Project:</strong>Industrial collaboration -&pound;5,000</p><p><strong>Award:</strong>The Royal Society of Chemistry Analytical Chemistry Trust Fund Summer Studentship<strong>(2015)</strong></p><p><strong>Title of Project:&nbsp;</strong>Multi-functional labels for carbohydrate analysis -&pound;1080</p><p><strong>Award:</strong>The Biochemical Society&ndash; Eric Reid Fund for Methodology<strong>(2015)</strong></p><p><strong>Title of Project:&nbsp;</strong>Characterising changes in carbohydrates - development of methodology to facilitate characterisation of carbohydrate biomarkers -&pound;950</p><p><em>Research Group members</em></p><p><strong>Sarah Needs</strong>(PhD student) (Feb 2015 - ) Biochemical basis of congenital&nbsp;glycosylation&nbsp;disorders</p><p><strong>Matthew Allen</strong>(PhD student) (Oct 2016 - ) Development of tools for glycan analysis and quantitative sialic acid glycomics</p><p><strong>Yahya Kahn</strong>(Feb 2017 - ) Preparation of recombinant<em>endo</em>-Lys-N [EC 3.4.24.20] for glycoproteomics applications</p><p><strong>Yakub Kahn</strong>(Feb 2017 - ) Isolation and structural characterisation of<em>N-</em>glycans from basidiomycetes</p><p><strong>Dr Emma Sery</strong>(Feb 2017 - ) Chemoenzymatic synthesis of specialty glycans</p><p><strong>Dr Katarzyna Brzezicka</strong>(Feb 2017 - ) Integrated workflows for carbohydrate analysis</p><p><em>Former Research Group members</em></p><p><strong>S&oslash;ren Kaas</strong>(April 2015 - April 2016) Design of novel radio-sensitizers</p><p><strong>Lucy McCanna</strong>&nbsp;(June 2015 - Dec 2015) Integrated workflows for carbohydrate biomarker characterisation</p><p><strong>Tony Horne</strong>(Jun 2015 - Jun 2016)&nbsp; Fluorinated salicyl anilides as inhibitors of mTORC1 signalling</p><p><strong>Abdullahi Adan</strong>(Feb 2016 - Jan 2017 )&nbsp;Investigating the effect of pathogenic and protective LRRK2 mutations on&nbsp;lysosomes</p><p><em>Co-supervision responsibilities</em><strong>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</strong></p><p>I have responsibilities as a co-supervisor for a number of other students in the School, providing expertise in chemical biology, cell biology and biochemical techniques.</p><p><strong>Sonia Azeggagh</strong>&nbsp; (2016&ndash; present) Project: A&ldquo;disease in a dish&rdquo; model for Parkinson&rsquo;s disease.&nbsp; Supervisory team:<strong>Dr. Daniel Berwick</strong>(primary supervisor) Dr. Sarah Allman, Dr. Kerry Murphy</p><p><strong>Tala Chehab</strong>(2014&ndash; 2018). Project: The role of calcium signalling in autophagy.&nbsp; Supervisory team:<strong>Dr. Martin Bootman</strong>(primary supervisor), Dr. Katja Rietdorf, Dr. Sarah Allman</p><p>&nbsp;</p><p>&nbsp;</p>
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c3fb382d8485dab4cd59eb0e02f58fdb biography <p>I completed a M.Sci. in Chemistry in 2001 at King&rsquo;s College, London.&nbsp; Following my undergraduate degree I undertook a short period of study at the University of Cambridge (Emmanuel College), working on small molecule natural product synthesis.&nbsp; I then worked as a lecturer in science at a college of further education, teaching applied sciences (chemistry,&nbsp;life sciences&nbsp;and health), the&nbsp;physical science&nbsp;components of vocational qualifications&nbsp;and working cross-faculty with curriculum access and learner&nbsp;support teams.&nbsp; After spending time teaching in the FE sector, I took a position in the chemical industry as a research scientist for ICI, developing polymer systems for commerical refinish products.&nbsp;&nbsp;</p><p>I returned to university to read for a D.Phil. in Organic Chemistry at the University of Oxford (Balliol College)&nbsp;under the supervision of Professor Ben Davis.&nbsp; My doctoral studies focused on carbohydrate synthesis and functional studies of interactions between synthetic oligosaccharides and carbohydrate binding proteins on microarray platforms.&nbsp; Upon completion of my doctorate, I moved to the Biochemistry Department at the University of Oxford as a post-doctoral research associate working within the Oxford Institute of Glycobiology, alongside reading part-time for a MA in Education with the The Open University (completed in 2013).&nbsp; I took up my current position as a lecturer in Chemistry with The Open University in March 2014.</p><h5>Qualifications</h5><p><strong>2013</strong>&nbsp;&nbsp;&nbsp;&nbsp;M.A. Education (distinction) (comprising: E891, E846, SEH806) - Faculty of Education and Language Studies, The Open University&nbsp;</p><p><strong>2013</strong>&nbsp;&nbsp;&nbsp;&nbsp;Postgraduate&nbsp;Diploma in Professional Studies in Education (distinction) - Faculty of Education and Language Studies, The Open University</p><p><strong>2012</strong>&nbsp;&nbsp;&nbsp;&nbsp;Postgraduate Certificate in Professional Studies in Education (distinction) - Faculty of Education and Language Studies,&nbsp; The Open University</p><p><strong>2009</strong>&nbsp;&nbsp;&nbsp;&nbsp;D.Phil. Organic Chemistry - Department of Chemistry, University of Oxford</p><p><em>&ldquo;Chemical Mapping - Chemoenzymatic synthesis of sialylated oligosaccharides as probes of innate immunity&rdquo;</em></p><p><strong>2003</strong>&nbsp;&nbsp;&nbsp;&nbsp;Certificate of Postgraduate Study (Organic Chemistry) - Department of Chemistry, University of Cambridge&nbsp;</p><p><strong>2003</strong>&nbsp;&nbsp;&nbsp;&nbsp;City and Guilds 7307 (Further and Adult Teacher&#39;s Certificate)</p><p><strong>2001</strong>&nbsp;&nbsp;&nbsp;&nbsp;M.Sci. Chemistry (1st) - Department of Chemistry, King&rsquo;s College London, University of London</p>
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c3fb382d8485dab4cd59eb0e02f58fdb name Sarah Ann Allman
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c3fb382d8485dab4cd59eb0e02f58fdb Description <p>I completed a M.Sci. in Chemistry in 2001 at King&rsquo;s College, London.&nbsp; Following my undergraduate degree I undertook a short period of study at the University of Cambridge (Emmanuel College), working on small molecule natural product synthesis.&nbsp; I then worked as a lecturer in science at a college of further education, teaching applied sciences (chemistry,&nbsp;life sciences&nbsp;and health), the&nbsp;physical science&nbsp;components of vocational qualifications&nbsp;and working cross-faculty with curriculum access and learner&nbsp;support teams.&nbsp; After spending time teaching in the FE sector, I took a position in the chemical industry as a research scientist for ICI, developing polymer systems for commerical refinish products.&nbsp;&nbsp;</p><p>I returned to university to read for a D.Phil. in Organic Chemistry at the University of Oxford (Balliol College)&nbsp;under the supervision of Professor Ben Davis.&nbsp; My doctoral studies focused on carbohydrate synthesis and functional studies of interactions between synthetic oligosaccharides and carbohydrate binding proteins on microarray platforms.&nbsp; Upon completion of my doctorate, I moved to the Biochemistry Department at the University of Oxford as a post-doctoral research associate working within the Oxford Institute of Glycobiology, alongside reading part-time for a MA in Education with the The Open University (completed in 2013).&nbsp; I took up my current position as a lecturer in Chemistry with The Open University in March 2014.</p><h5>Qualifications</h5><p><strong>2013</strong>&nbsp;&nbsp;&nbsp;&nbsp;M.A. Education (distinction) (comprising: E891, E846, SEH806) - Faculty of Education and Language Studies, The Open University&nbsp;</p><p><strong>2013</strong>&nbsp;&nbsp;&nbsp;&nbsp;Postgraduate&nbsp;Diploma in Professional Studies in Education (distinction) - Faculty of Education and Language Studies, The Open University</p><p><strong>2012</strong>&nbsp;&nbsp;&nbsp;&nbsp;Postgraduate Certificate in Professional Studies in Education (distinction) - Faculty of Education and Language Studies,&nbsp; The Open University</p><p><strong>2009</strong>&nbsp;&nbsp;&nbsp;&nbsp;D.Phil. Organic Chemistry - Department of Chemistry, University of Oxford</p><p><em>&ldquo;Chemical Mapping - Chemoenzymatic synthesis of sialylated oligosaccharides as probes of innate immunity&rdquo;</em></p><p><strong>2003</strong>&nbsp;&nbsp;&nbsp;&nbsp;Certificate of Postgraduate Study (Organic Chemistry) - Department of Chemistry, University of Cambridge&nbsp;</p><p><strong>2003</strong>&nbsp;&nbsp;&nbsp;&nbsp;City and Guilds 7307 (Further and Adult Teacher&#39;s Certificate)</p><p><strong>2001</strong>&nbsp;&nbsp;&nbsp;&nbsp;M.Sci. Chemistry (1st) - Department of Chemistry, King&rsquo;s College London, University of London</p>
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